Browse of TCMCG006C70091 protein

CDS

Accession Number	TCMCG006C70091
gbkey	CDS
Protein Id	XP_013706548.1
Location	join(13917891..13917914,13918009..13918082,13918170..13918309,13918383..13918469,13918545..13918632,13918727..13918804,13918948..13919025,13919109..13919188,13919601..13919679,13919799..13920110,13920301..13920360,13920563..13920776,13920852..13920900,13920981..13921123,13921340..13922683,13922793..13922970,13923090..13923207,13923358..13923445,13923562..13923640,13923737..13924032,13924130..13925204,13925318..13925695,13925796..13926403)
Gene	LOC106410568
GeneID	106410568
Organism	Brassica napus

Protein

Length	1889aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013851094.2
Definition	mediator of RNA polymerase II transcription subunit 13-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTCTTCAGAATTGGGGGTCTTCATCACGTTTCTTGGTTTCAGTTTCTTCCTAGTGAAGCTGAGCTCAATCCCACCTCTGATACAAGTTCAAGAGCTGAGCAGAATGATGTTGCTACATATCTTGTGCTTTCATCTCATCTGCGCTTGCACAAGGAAGGCTTTCTTAGCACATGGACCAATTCTTTCGTTGGACCTTGGGATCCATCTCAAGGCTTATACAACCCTGACGAAAAGATCAAGCTTTGGCTTTTTCTTCCTGGACGTCATTCATCAATCACTGATAAAGCTCAGGCTGCTGTCTCAAAGCTTAGAGTTGTTGCGTCAGGAATCTGGGTAGCACCTGGGGACTCTGAGGAGATATCTGTTGCCTTTTCACAGTCTTTGCGTAATTGCATTGAAAGAGCGTTAAGTGGACTTTCCTACATGAGATTCGGAGACGTGTTTTCAAAAGTCAGCCCTCAAAATGAAGAATATTTGAGGAGGGGTCGTCTTACTGTTGAATTCATATTTGCTGCTACCGAAGAGGCAGTTTTTGTCCATGTCATTGTTTCTGCCAAGAATGTCCGGACACTTTCAAGTGGCGATGCTGAGAGGCTGTCAAGGAGTTCTTTAAAAAACTCCAGTTATAGGCTTCCAGTGATTGTTTCTCCTCATGGAATGCGGGGTAGCCTCACTGGATTCTGTCCCAATGACCTTGTCAAGCAAGTCTACTTCAGTTCTGGAAACTTAAGGTCTTCAAGTGGATATATTGGTCTCCCTCCTCATGCTGGTAGTGCGTCCCGTCTGATAAATGGCGATCACTGTTACGTGGAAGTTACACTTGGTTGCTGCCAAAATATAAATGACAACACAAGTCAAACTAATTCAACCTTTGCGGTCAATGTTCCCCAAACATCAGTTGGGAGTAAAGATCACCGGAAAGGACACCCAGATATATTATCGATGTGTGAAAAAAGGTTCATATATCCAGCTGAGGCAGTGCTTGTGCCAATCTTACAGTCGGCATTTGCTAAATTTTCTTTGAAAAGATTTTGGCTTCAAAACTGGATAGGACCATCACTGGCAGGCTCGTCGTTATTTATGCACTGGGCTGGTGATTTTGACTTCTTTGGAGCGTCTGGAAATAAGAGTGATGGGTTCTATGAAAAAAATGGCTATAATAGCAGTGGCAGTAGCGGTAATAGCAGCATTAGTTCAACAAGTAGTGCTTCTAGCGGGAGTGGTTGGAGAATGACTTCAAGAACTGGTGACCTTGATGCGGATGCAGATTCTTTGACTTGTAAAGATGATCACCCAAAATTGGGTTCCAAGCGGCCGCGAACAGGGATGGCAGAGTCATTCGGTCAAGTAGGCACTGCAAATGATCAATTTGGTTGGGATTGGGATGATGACGATGATGATGATAGAGGAGTTGGCATGGATATCCAAGCACTTCTTTCAGAGTTTGGGGACTTTGGTGACTTCTTTGAGAATGATGCGTTACCTTTTGGGGAGCCGCCGGGAACAGCAGAGTCGCATTCCCTCATACTTCCTTCAGATTCTGCTGATGTAGGTTCGAGTCCAATGGATATGGTGGATGTATCAGACCAGATTGTGTTGCCCGTTGGATTTTCGTCTTTTGAGAGCTTTAATCCTGCTCCCCCTATCATTGATGAAGGCCTTATCAAAAGTCAAGAAGTCATCAACAACAGTGTCACTTCAGCTTCAGCTCCTTCAAATCAAATGTCAAGCTCTTCTAACAGTGAGTTCGATCATTTGATGAAAGCAGAAGCTATGATGACATTTGCTCCCGAGTATGGAGCTGTTGAAGCACCTATGAGCGAGCTTTCGTCGACGTCTTTCAAAAGCCCATATCTTCCCAAGTCTCATAAAGTGGAGAGTTCAAATTCAAGAACGAGTAACTATGTTTATGGACCCACACCACCTGCCACTGATTCTAATGGAGCAGCCGATAAGATTTTGCTTGGATCAAAAGCATACATTGGTAACAATGATGGCAGAACTTTGTACACTAAGGTAGAGGGCAGAAAGGACCAATATGATAAGCTACCTACTTTAATCAGTGACAACAATAGTAAAAAGAAGGGTGTGTTTCAGTTAAAATATTCAAACTACAATGCTGCTAGTGCTGTTAAGACTGTACAGGGGAAAAAGACTGACGGTATATCTGCTGTTGTTAGTACTTTGTTATCTTCAAAGACCTTGCTGGCAACAGACGTGGGAAGCGTTATGTTCCAAGCCTTCATGTATAGGATGCGGCACAAAGCCATTTCTTCGAAGCACAGTTCACCTGTTAGTCTGAGTGGGCTGAGTGGAAACTTCTTCTTGAACCAGGTGCCAAATGGGCCTAGTAGTCTGACAGACAACGTATCTGCAAGGAACGAGATATATAAGAAAGAAGTACCTACTAGAATAGCTGGAGATTTCGATGGAGGAATGTTAGACAGCCACATGAGTGCACCAGTTGGCGTGTGGCGGACTGTTTCAGTCCCAAAAACAGCTAAACCTGCTAGTTCGCCAAACATTGAGGCAGGCTCATCCTTGCCCCACAGTTCGTTTAGCGAAAACAGCTTGCTTTCTTATGGCCAAAAGCAGCCGTTGCAGGAGCTTCTAGATGGAATAGCACTACTTGTACAGCAAGCTACTTCTTTCGTTGATTTAGCTCTGGATTCAGATTGTGGGGATGGACCTTATGGCTGGCTTGCACTGGAAGAATTGTGGAGACGGGAACTGTCGTGTGGACCCTCTGCTGGCCATGCAGGCTGTGGGGGAACTTTGGCTTCCTGCCATTCTCTGGACATTGCTGGTGTCAAGCTAGTTGACCCACTCTCTGCTGAGGTTTTTCCTTCCTCTGTCATTACACTACTGCAATCTGACATCAAGACAGCTCTGAAATCCGCATTTGGTCAGTCAGACGGGCCATTATATGTCACAGATTGGTGCAAGGGCCGAAATCAATCAATGGATGGAGTATCTATTTCCGAGGGATCTACTGCTGAGTCAGTCCTGAGTGAAGTGTCAAATGCGATAGATGGTGGGAAAGGAGAGGAGTCTGCGCAGAGCCAAGATATATACAGTTCAGAGTTACTCCGACCTACACTTTTTGTTCTTCCATCACCCTCTATACTTGTCGGGTACCAAGATGACTGGCTTAAGGTTTCAACCAACTCCTTGCCACATTGGGAAAAGGCCCCTTTCGAGCCATATGCTCTGCCGAAAAATATGAACTATACTGTTGTATGTCCAGATATAGATCCTTTAACCAGTGCTGCTGTTGATTTCTTCCAACAACTTGGAACTGTTTATGAAACGTGCAGACTGGGAACCCATTTGCCAACGATCCTGGGAAATCAAATGGAAACTGACGCTGGAAGATTATCCTCATCAGGATTTGTTCTGCTTGATTGCCCTCAGTCGATGAAGATTGAAAGCAATAACACGTCGCTTCTGGGATCTCTCAGTGATTATTTTCTGTCCTTGTCGAATGGGTGGAATGTAAATAGCTACCTGAAGTCTTTATCAAAAGCGCTGAAAGGTCTTAAGCTTGGGTCTGGGCTTTACACAAACCAGAAAGAAGGGTCAGCTAGTCCATGCATGGTAGTGTACATAGTGTGTCCATTTCCAGACCCTTCGGCAGTTTTAAGGACAGTCGTTGAATCGTCTATAGCACTTGGATCAGGGATACAGCCAGACAGAGACCGGAGATCTTTACTTAATAGTCAGGTTGCAAGGGCCTTTGGTAGTTCTGCTGCTGTAGACGAAGCATCAATATCTCACATTCCAGTGCTTTCGGGGTTTAGCGTCCCTAAACTAGTTCTACAAGTTGTGTCTGTTGATTCTATTTTCCGGATAACAAGTCCAAGCTTTAATGAGCTTGTCATCCTCAAGGATACTGCCTTTTCTGTCTACAATAAAGCTCGGAGAATTTCAAGAGGAATGCCTAATGATGCATTTCTCTCATCATCATCATTATCTAGCAGATCCTCTTCAGCCTTGGCATCAGTGAATTCTATCTCAGGAATCTGGAAAGACTGCGTCAGTTCTCGAATGACAGGTTCTACACATCCAAGAGATGGTGATATTGATGGTAGCATTAGAACGAGTAGTTGGGATAGTAGCTGGCAAATAACAAGATCTGGAGGATTAAGCTGCGACTCAAACAGAAACGGAGATTTTTACATTAATGATGCAATTTTCTATCTATTTGAACCGCTTTTCATCCTTTCCGAGCCTGGTTCTGTGGATCGTGGAGTTTCACCTACTTTCGGCGGCTTAGGGTCTGAGTCTTCAAAGCCAATACCTGAGGATGGTGGCAGAGGTTCAGGACTTGGCGTCAATTCAATGGAAGGTACAAGCTCCCACGGGGATGCATCACAGGTTGAAGGGAAGGCTGTTCCAAGCTTACATTGCTGCTACGGTTGGACAGAGGACTGGAGATGGCTTGTAAGCATCTGGACGGACGCCAGGGGTGAATTGCTTGACACACATATATTCCCCTTTGGTGGGATTAGCAGTAGACAGGATACGAAAGGGCTGCAGTGTCTTTTTGTTCAAGTTCTGCAGCAGGGATGTCAGATACTACAGGCATGTTCCTCCCCTGAAAATGGATCTTTCAAACCCAGGGATTTTGTCATTACGCGCATTGGGAGTTTCTTTGAGCTTGAGTACCTAGAGTGGCAAAAGGCAATTTACACAGCTGGAGGTCCTGAGATTAAGAAGTGGCCTATTCAACTTCGACGTTCTGCACCTTCTGGCGTAGCCACCAATAGCAACGGACCTTCCTTGCAACAGCATGATCTGAGTTTAATTCAGGAGAGAATTCAAGAGAGAGCCTCGTCAACTAGCACACTCTACGGTGCTCACTCAAAACCATCCACCTTTGTGAAAGGCGGTATGGGGCACTCGGGTGGAAGAAAGCAAACAATGGGTGGACAAACCATTTCTGGTACTCCAAGGGGTTTGTTTCAGTGGGTTCACAGCATCAGTTTTGCTTCTATTTCACTTGATCATTCTCTGCATTTTGTTCTTCCGGCTGAGTTGGTATCTCCTGGAGGTGGACAGAGCAGTACTGGTATGAGTTCAGCAAATTACATTGAAGGTTTCACTCCAGTCAAGTCTCTTGGGTCAACGGCTTTTGCTTACATGATGATACCATCACCCAACATGCGCTTTCTTCACCCAAGTCCTCTTCAGCTTCCTACATGTTTAACTGCGGAATCACCTCCACTTGCTCACCTCCTTCACAGCAAAGGCTGTGCAATCCCCTTGTCTACCGGATTTGTTGTTTCAAAAGCTGTGCCTTCCATGAGAAAAGACTCGCGAATAAACGTGAAAGAAGAATGGCCATCAGTTCTCTCTGTAAGTCTCATAGACTATTATGGTGGTTATGACAACGCTCATGACAAAGTTCTTCAAGGAATCATGAAGCAAGGCGGTGGACGGACCAAAGAAACTAGAGATTTTGAGGTTGAAAGCCATCTAATCCTTGAGTCAATTGCAGCAGAACTCCATGCTCTATCGTGGATGACTGTTAGTCCAGCATATCTGGATAGGCGGACTGCATTGCCGTCTCACTGTGATGTGGTTCTCAGACTGAGTCGTCTACTTCATTTTGCGGATAAAGAACGCTCCAGGCTACCAGATAAGTCAGGAGTTTGA

Protein:   MWTNVFRIGGLHHVSWFQFLPSEAELNPTSDTSSRAEQNDVATYLVLSSHLRLHKEGFLSTWTNSFVGPWDPSQGLYNPDEKIKLWLFLPGRHSSITDKAQAAVSKLRVVASGIWVAPGDSEEISVAFSQSLRNCIERALSGLSYMRFGDVFSKVSPQNEEYLRRGRLTVEFIFAATEEAVFVHVIVSAKNVRTLSSGDAERLSRSSLKNSSYRLPVIVSPHGMRGSLTGFCPNDLVKQVYFSSGNLRSSSGYIGLPPHAGSASRLINGDHCYVEVTLGCCQNINDNTSQTNSTFAVNVPQTSVGSKDHRKGHPDILSMCEKRFIYPAEAVLVPILQSAFAKFSLKRFWLQNWIGPSLAGSSLFMHWAGDFDFFGASGNKSDGFYEKNGYNSSGSSGNSSISSTSSASSGSGWRMTSRTGDLDADADSLTCKDDHPKLGSKRPRTGMAESFGQVGTANDQFGWDWDDDDDDDRGVGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESHSLILPSDSADVGSSPMDMVDVSDQIVLPVGFSSFESFNPAPPIIDEGLIKSQEVINNSVTSASAPSNQMSSSSNSEFDHLMKAEAMMTFAPEYGAVEAPMSELSSTSFKSPYLPKSHKVESSNSRTSNYVYGPTPPATDSNGAADKILLGSKAYIGNNDGRTLYTKVEGRKDQYDKLPTLISDNNSKKKGVFQLKYSNYNAASAVKTVQGKKTDGISAVVSTLLSSKTLLATDVGSVMFQAFMYRMRHKAISSKHSSPVSLSGLSGNFFLNQVPNGPSSLTDNVSARNEIYKKEVPTRIAGDFDGGMLDSHMSAPVGVWRTVSVPKTAKPASSPNIEAGSSLPHSSFSENSLLSYGQKQPLQELLDGIALLVQQATSFVDLALDSDCGDGPYGWLALEELWRRELSCGPSAGHAGCGGTLASCHSLDIAGVKLVDPLSAEVFPSSVITLLQSDIKTALKSAFGQSDGPLYVTDWCKGRNQSMDGVSISEGSTAESVLSEVSNAIDGGKGEESAQSQDIYSSELLRPTLFVLPSPSILVGYQDDWLKVSTNSLPHWEKAPFEPYALPKNMNYTVVCPDIDPLTSAAVDFFQQLGTVYETCRLGTHLPTILGNQMETDAGRLSSSGFVLLDCPQSMKIESNNTSLLGSLSDYFLSLSNGWNVNSYLKSLSKALKGLKLGSGLYTNQKEGSASPCMVVYIVCPFPDPSAVLRTVVESSIALGSGIQPDRDRRSLLNSQVARAFGSSAAVDEASISHIPVLSGFSVPKLVLQVVSVDSIFRITSPSFNELVILKDTAFSVYNKARRISRGMPNDAFLSSSSLSSRSSSALASVNSISGIWKDCVSSRMTGSTHPRDGDIDGSIRTSSWDSSWQITRSGGLSCDSNRNGDFYINDAIFYLFEPLFILSEPGSVDRGVSPTFGGLGSESSKPIPEDGGRGSGLGVNSMEGTSSHGDASQVEGKAVPSLHCCYGWTEDWRWLVSIWTDARGELLDTHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPENGSFKPRDFVITRIGSFFELEYLEWQKAIYTAGGPEIKKWPIQLRRSAPSGVATNSNGPSLQQHDLSLIQERIQERASSTSTLYGAHSKPSTFVKGGMGHSGGRKQTMGGQTISGTPRGLFQWVHSISFASISLDHSLHFVLPAELVSPGGGQSSTGMSSANYIEGFTPVKSLGSTAFAYMMIPSPNMRFLHPSPLQLPTCLTAESPPLAHLLHSKGCAIPLSTGFVVSKAVPSMRKDSRINVKEEWPSVLSVSLIDYYGGYDNAHDKVLQGIMKQGGGRTKETRDFEVESHLILESIAAELHALSWMTVSPAYLDRRTALPSHCDVVLRLSRLLHFADKERSRLPDKSGV